PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0477s0020.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 233aa    MW: 26133.4 Da    PI: 10.4169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0477s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.58.7e-10109150351
                     AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                              +GV++  k+ +W A I++      +k+++lg+ g+ ++Aa ++++a+ 
  SapurV1A.0477s0020.1.p 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQDDAAHLYDRAAF 150
                             79**98..47*********4.....5********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003809.8E-4108165IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-7109153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.0E-5111155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MVSLRRRKLL GLCAGRSSFL TPLPRFFDNG TPPVGSAQNG RSVSVHPLPS DDANLPEEKT  60
IAKVGAGSSN VSASSSSKEQ RSQPYPEQPV KRRKRHRRKH VQNQEPCLMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTVGSQDD AAHLYDRAAF MCGREPNFEL SEEEKQELRK FKWDEFLAIT  180
RSAINNKKHK RRIGVGLQKR SETTLQDGDW DGKERLNGFS ASEDVEPDSS AS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006386877.11e-147hypothetical protein POPTR_0002s24750g
RefseqXP_006386876.11e-147hypothetical protein POPTR_0002s24750g
RefseqXP_002303060.21e-147hypothetical protein POPTR_0002s24750g
RefseqXP_006386878.11e-147hypothetical protein POPTR_0002s24750g
TrEMBLB9GQL71e-147B9GQL7_POPTR; Uncharacterized protein
STRINGPOPTR_0002s24750.11e-147(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-47ERF family protein